Get Started
New to copick? Install the package and run through the quick start, then pick the storage setup that matches where your data lives.
Quick start
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Quick Start
Install copick and set up a simple project in a few minutes.
Set up a project
copick projects can be distributed across multiple storage backends. The following short tutorials outline the most common setups, and provide template configuration files for each case.
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Local Project
All data is accessible on the local filesystem.
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cryoET Data Portal Project
Static data is accessed via the CZ cryoET Data Portal.
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Shared Project
Some or all data is stored on a shared filesystem.
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S3 Project
Some or all data is stored on AWS or local S3.
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SSH Project
Some or all data is stored on a filesystem accessible via SSH.
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mlcroissant Project
Data is described by an ML Commons Croissant manifest.