copick new run
core
Create an empty run with the given name.
Usage
Description
Adds a new, empty run to the project so that tomograms, picks, segmentations,
and other entities can later be attached to it. By default (--create) the run
is created if it does not already exist; pass --overwrite to replace an
existing run of the same name.
Arguments
| Argument | Description |
|---|---|
NAME |
The name of the new run to be created. |
Options
| Option | Type | Default | Description |
|---|---|---|---|
-c, --config |
path | — | Path to the configuration file. |
--overwrite / --no-overwrite |
boolean flag | False |
Overwrite the object if it exists. |
--create / --no-create |
boolean flag | True |
Create the object if it does not exist. |
--debug / --no-debug |
boolean flag | False |
Enable debug logging. |
Examples
# Create a new run
copick new run --config config.json TS_005
# Create a run, overwriting any existing run of the same name
copick new run --config config.json --overwrite TS_005
See also
copick new voxelspacing— add a voxel spacing to a runcopick add tomogram— import a tomogram into a run