Sample random points in/on/outside a mesh.
Tags
copickplanefittingsurface
Solution written by
Utz H. Ermel
License of solution
MIT
Source Code
Arguments
--copick_config_path
Path to the Copick configuration JSON file. (default value: PARAMETER_VALUE)
--run_names
Comma-separated list of run names. (default value: )
--voxel_spacing
Voxel spacing. (default value: PARAMETER_VALUE)
--tomo_type
Type of tomogram. (default value: PARAMETER_VALUE)
--input_object
Name of the input object. (default value: PARAMETER_VALUE)
--input_user
Name of the input user. (default value: PARAMETER_VALUE)
--input_session
ID of the input session. (default value: PARAMETER_VALUE)
--num_surf
Approx. number of points on the mesh surface. (default value: 500)
--num_internal
Approx. number of points inside the mesh. (default value: 500)
--num_random
Approx. number of random points outside the mesh (negative examples). (default value: 100)
--min_dist
Minimum distance (in angstrom) between points. (default value: 500)
--edge_dist
Minimum distance (in voxels) from the volume bounds. (default value: 32)
--seed
Random seed. (default value: 0)
--output_object
Name of the output object. (default value: PARAMETER_VALUE)
--output_user
Name of the output user. (default value: sampled)
--output_session
Name of the output session. (default value: 0)